Silkworm Genes on the GO term of GO:0031974

Silkworm Genome Database

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GO:0031974

    <term id="GO:0031974" ontology="Cellular Component" desc="membrane-enclosed lumen">
        <term id="GO:0043233" desc="organelle lumen">
            <term id="GO:0031981" desc="nuclear lumen">
                <term id="GO:0005654" desc="nucleoplasm">
                    <term id="GO:0044451" desc="nucleoplasm part">
                        <term id="GO:0005665" desc="DNA-directed RNA polymerase II, core complex">
                            <gene id="BGIBMGA003484"/>
                        </term>
                        <term id="GO:0016585" desc="chromatin remodeling complex">
                            <term id="GO:0005677" desc="chromatin silencing complex">
                                <gene id="BGIBMGA001401"/>
                                <gene id="BGIBMGA005086"/>
                                <gene id="BGIBMGA005532"/>
                                <gene id="BGIBMGA007984"/>
                                <gene id="BGIBMGA012834"/>
                            </term>
                        </term>
                        <term id="GO:0005667" desc="transcription factor complex">
                            <gene id="BGIBMGA003403"/>
                            <gene id="BGIBMGA006232"/>
                            <gene id="BGIBMGA006899"/>
                            <gene id="BGIBMGA007534"/>
                            <gene id="BGIBMGA012459"/>
                            <gene id="BGIBMGA012880"/>
                            <term id="GO:0005672" desc="transcription factor TFIIA complex">
                                <gene id="BGIBMGA005169"/>
                            </term>
                            <term id="GO:0005674" desc="transcription factor TFIIF complex">
                                <gene id="BGIBMGA003166"/>
                            </term>
                            <term id="GO:0005673" desc="transcription factor TFIIE complex">
                                <gene id="BGIBMGA000355"/>
                                <gene id="BGIBMGA005878"/>
                            </term>
                            <term id="GO:0000123" desc="histone acetyltransferase complex">
                                <term id="GO:0043189" desc="H4/H2A histone acetyltransferase complex">
                                    <gene id="BGIBMGA004380"/>
                                </term>
                            </term>
                            <term id="GO:0005669" desc="transcription factor TFIID complex">
                                <gene id="BGIBMGA003121"/>
                                <gene id="BGIBMGA003891"/>
                                <gene id="BGIBMGA007359"/>
                                <gene id="BGIBMGA010172"/>
                                <gene id="BGIBMGA010619"/>
                                <gene id="BGIBMGA010667"/>
                            </term>
                        </term>
                        <term id="GO:0005666" desc="DNA-directed RNA polymerase III complex">
                            <gene id="BGIBMGA008718"/>
                        </term>
                        <term id="GO:0016591" desc="DNA-directed RNA polymerase II, holoenzyme">
                            <term id="GO:0005672" desc="transcription factor TFIIA complex">
                                <gene id="BGIBMGA005169"/>
                            </term>
                            <term id="GO:0005665" desc="DNA-directed RNA polymerase II, core complex">
                                <gene id="BGIBMGA003484"/>
                            </term>
                            <term id="GO:0005674" desc="transcription factor TFIIF complex">
                                <gene id="BGIBMGA003166"/>
                            </term>
                            <term id="GO:0005673" desc="transcription factor TFIIE complex">
                                <gene id="BGIBMGA000355"/>
                                <gene id="BGIBMGA005878"/>
                            </term>
                            <term id="GO:0005669" desc="transcription factor TFIID complex">
                                <gene id="BGIBMGA003121"/>
                                <gene id="BGIBMGA003891"/>
                                <gene id="BGIBMGA007359"/>
                                <gene id="BGIBMGA010172"/>
                                <gene id="BGIBMGA010619"/>
                                <gene id="BGIBMGA010667"/>
                            </term>
                        </term>
                    </term>
                </term>
                <term id="GO:0005730" desc="nucleolus">
                    <gene id="BGIBMGA006588"/>
                    <term id="GO:0044452" desc="nucleolar part">
                        <term id="GO:0030685" desc="nucleolar preribosome">
                            <term id="GO:0030688" desc="nucleolar preribosome, small subunit precursor">
                                <gene id="BGIBMGA011103"/>
                            </term>
                        </term>
                        <term id="GO:0005732" desc="small nucleolar ribonucleoprotein complex">
                            <gene id="BGIBMGA006056"/>
                        </term>
                    </term>
                </term>
            </term>
            <term id="GO:0031970" desc="organelle envelope lumen">
                <term id="GO:0005758" desc="mitochondrial intermembrane space">
                    <gene id="BGIBMGA007343"/>
                    <term id="GO:0042719" desc="mitochondrial intermembrane space protein transporter complex">
                        <gene id="BGIBMGA000106"/>
                        <gene id="BGIBMGA003070"/>
                        <gene id="BGIBMGA008507"/>
                        <gene id="BGIBMGA014607"/>
                    </term>
                </term>
            </term>
            <term id="GO:0031980" desc="mitochondrial lumen">
                <term id="GO:0005759" desc="mitochondrial matrix">
                    <gene id="BGIBMGA009841"/>
                    <term id="GO:0005761" desc="mitochondrial ribosome">
                        <gene id="BGIBMGA000440"/>
                    </term>
                </term>
            </term>
        </term>
    </term>

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Publications

• Science 306, 1937-1940 (2004)( PDF )

• Nucleic Acids Research 33, 399-402 (2005)( PDF )

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